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Genomics Data | Vol.7, Issue.C | 2017-05-23 | Pages

Analysis of copy number variations in Mexican Holstein cattle using axiom genome-wide Bos 1 array

Ricardo Salomon-Torres,Rafael Villa-Angulo,Carlos Villa-Angulo

Abstract

Recently, for copy number variation (CNV) analysis, bovine researchers have focused mainly on the use of genome-wide SNP genotyping arrays. One of the highest densities commercially available SNPchips for cattle is the Affymetrix axiom genome-wide Bos 1, which assays 648,315 informative SNPs across the whole bovine genome. Here, we describe the microarray data, quality controls and validation implemented in a study published in Genetics and Molecular Research Journal in 2015 [1]. The microarray raw data has been deposited into Gene Expression Omnibus under accession #GSE54813.

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Analysis of copy number variations in Mexican Holstein cattle using axiom genome-wide Bos 1 array

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Keywords

microarray data quality controls genomewide snp genotyping molecular research copy number variation cnv gene expression omnibus

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Ricardo Salomon-Torres,Rafael Villa-Angulo,Carlos Villa-Angulo,.Analysis of copy number variations in Mexican Holstein cattle using axiom genome-wide Bos 1 array. 7 (C),.

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